Strain Fitness in Pseudomonas simiae WCS417 around PS417_17325

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
3,784,799	+		PS417_17320	0.54	+0.0
3,785,308	+		PS417_17320	0.89	-0.1
3,785,379	+				+0.1
3,785,379	+				+0.1
3,785,380	-				+2.2
3,785,380	-				+0.9
3,785,380	-				-1.6
3,785,394	-				+1.1
3,785,749	+				+2.2
3,785,750	-				+0.4
3,785,750	-				-2.3
3,785,983	+		PS417_17325	0.26	+0.9
3,785,984	-		PS417_17325	0.26	-1.1
3,785,984	-				+0.8
3,785,984	-		PS417_17325	0.26	+1.8
3,786,178	+		PS417_17325	0.41	+0.6
3,786,178	+		PS417_17325	0.41	+0.7
3,786,394	+		PS417_17325	0.56	-0.2
3,786,394	+				+0.0
3,786,602	+		PS417_17325	0.72	-0.0
3,787,009	+				+0.2
3,787,074	+				+0.1
3,787,075	-				+0.0
3,787,075	-				+0.6
3,787,180	-		PS417_17330	0.15	+0.8
3,787,455	+		PS417_17330	0.36	-1.4
3,787,891	+		PS417_17330	0.71	+1.0
3,787,974	+		PS417_17330	0.77	+1.1
3,787,989	-		PS417_17330	0.78	+0.1