Strain Fitness in Pseudomonas simiae WCS417 around PS417_17130

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
3,739,681	+				-0.2
3,739,801	+		PS417_17125	0.17	+1.5
3,739,801	+		PS417_17125	0.17	+1.0
3,739,802	-		PS417_17125	0.17	-1.5
3,740,075	+		PS417_17125	0.56	-1.5
3,740,140	+		PS417_17125	0.65	+1.5
3,740,360	+				+2.7
3,740,452	-				-0.2
3,740,470	-				-0.6
3,740,654	+		PS417_17130	0.12	-0.2
3,741,035	+		PS417_17130	0.41	+1.0
3,741,036	-		PS417_17130	0.41	-0.5
3,741,252	+		PS417_17130	0.57	-0.8
3,741,297	+		PS417_17130	0.60	+0.3
3,741,329	+		PS417_17130	0.63	-0.1
3,741,329	+				-0.6
3,741,330	-		PS417_17130	0.63	-1.2
3,741,378	-		PS417_17130	0.66	-0.6
3,741,378	-		PS417_17130	0.66	-0.1
3,741,632	+		PS417_17130	0.86	+0.5
3,741,633	-		PS417_17130	0.86	-1.5
3,741,645	-		PS417_17130	0.87	-2.7
3,741,804	+				-0.6
3,741,805	-				-0.6
3,741,805	-				-0.2
3,741,817	-				+1.0
3,741,971	-				-0.7
3,741,982	+				+0.8
3,741,982	+				-0.5
3,742,001	-				+1.5
3,742,483	+		PS417_17135	0.45	+1.4
3,742,489	+		PS417_17135	0.46	+0.5
3,742,568	+		PS417_17135	0.55	+0.5
3,742,568	+		PS417_17135	0.55	+1.4
3,742,569	-		PS417_17135	0.55	+0.5
3,742,614	+		PS417_17135	0.60	+0.4
3,742,614	+		PS417_17135	0.60	-0.3
3,742,615	-		PS417_17135	0.60	+0.2