Strain Fitness in Pseudomonas simiae WCS417 around PS417_17050

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
3,724,931	+		PS417_17045	0.18	+0.7
3,725,026	+		PS417_17045	0.26	-0.2
3,725,078	+		PS417_17045	0.31	+0.4
3,725,079	-		PS417_17045	0.31	-0.3
3,725,270	-		PS417_17045	0.48	-0.3
3,725,345	+		PS417_17045	0.54	-0.3
3,725,345	+		PS417_17045	0.54	-1.5
3,725,345	+		PS417_17045	0.54	-2.5
3,725,346	-		PS417_17045	0.54	-0.7
3,725,360	-		PS417_17045	0.55	+0.1
3,725,360	-		PS417_17045	0.55	-1.0
3,725,500	-		PS417_17045	0.68	-1.0
3,725,500	-		PS417_17045	0.68	-0.6
3,725,576	+				+1.7
3,725,654	+		PS417_17045	0.81	-2.7
3,725,654	+		PS417_17045	0.81	+1.9
3,725,654	+		PS417_17045	0.81	-0.6
3,725,655	-				+3.7
3,725,655	-		PS417_17045	0.81	-0.9
3,725,723	+		PS417_17045	0.87	-2.3
3,726,005	+		PS417_17050	0.30	+1.3
3,726,043	+		PS417_17050	0.38	+0.6
3,726,043	+		PS417_17050	0.38	+2.0
3,726,044	-		PS417_17050	0.39	+0.2
3,726,044	-		PS417_17050	0.39	-0.2
3,726,081	-				+0.7
3,726,349	+				-3.1
3,726,415	-				-0.7
3,726,449	+				-1.0
3,726,449	+				-1.0
3,726,450	-				+0.0
3,726,453	-				+0.7
3,726,496	+				-2.0
3,726,499	+				-0.3
3,726,500	-				+0.3
3,726,500	-				+0.5
3,727,004	-		PS417_17055	0.46	-2.7
3,727,202	+		PS417_17055	0.62	-0.3
3,727,203	-		PS417_17055	0.62	-1.4