Strain Fitness in Pseudomonas simiae WCS417 around PS417_17000

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
3,712,831	+				+0.7
3,712,832	-				-0.1
3,713,377	-		PS417_16995	0.64	-0.7
3,713,377	-		PS417_16995	0.64	-1.2
3,713,467	+		PS417_16995	0.73	+0.8
3,713,468	-		PS417_16995	0.74	+0.2
3,713,599	+		PS417_16995	0.88	-0.3
3,713,600	-		PS417_16995	0.88	-1.0
3,713,600	-		PS417_16995	0.88	-1.5
3,713,713	+				-0.1
3,713,805	-				-1.3
3,713,808	+				+1.3
3,713,808	+				+1.3
3,713,809	-				+0.3
3,713,865	+		PS417_17000	0.18	-2.6
3,713,916	+		PS417_17000	0.31	-2.6
3,715,107	-				+0.8
3,715,163	+				+0.7
3,715,163	+				+0.3
3,715,163	+				-0.0
3,715,163	+				+0.8
3,715,163	+				+0.3
3,715,164	-				-0.6
3,715,173	+				+0.8