Strain Fitness in Pseudomonas simiae WCS417 around PS417_16555

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
3,618,159	+		PS417_16555	0.49	+0.0
3,618,213	+		PS417_16555	0.53	-1.0
3,618,304	-		PS417_16555	0.61	-2.0
3,618,767	+				-0.7
3,618,767	+				+0.0
3,618,768	-				+0.3
3,618,768	-				-0.2
3,618,768	-				+0.7
3,618,768	-				-0.5
3,618,768	-				-0.6
3,618,829	-		PS417_16560	0.18	+0.8
3,619,076	-		PS417_16560	0.77	+0.8
3,619,091	-		PS417_16560	0.80	-2.8
3,619,240	+				-0.8
3,619,240	+				-1.3
3,619,240	+				-1.8
3,619,280	+				+0.8
3,619,280	+				-1.8
3,619,281	-				+1.8
3,619,281	-				+0.3
3,619,281	-				-0.2
3,619,281	-				-2.7
3,619,281	-				+0.2
3,619,372	-				-0.3
3,619,372	-				+0.9
3,619,720	+		PS417_16565	0.43	-0.1