Strain Fitness in Pseudomonas simiae WCS417 around PS417_16185

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
3,547,609	-		PS417_16180	0.42	+0.2
3,547,609	-		PS417_16180	0.42	-1.9
3,547,656	+		PS417_16180	0.46	-0.6
3,548,036	-		PS417_16180	0.78	+0.2
3,548,130	+		PS417_16180	0.86	+1.7
3,548,131	-		PS417_16180	0.86	+1.3
3,548,367	-				+0.3
3,548,367	-				+0.0
3,548,368	+				-0.7
3,548,449	-				-1.0
3,548,449	-				-1.0
3,548,490	-		PS417_16185	0.19	+1.6
3,548,494	-		PS417_16185	0.20	-2.4
3,548,506	-		PS417_16185	0.23	+1.5
3,548,509	-		PS417_16185	0.24	-0.1
3,548,834	+				-0.5
3,548,865	+				-1.0
3,549,236	+		PS417_16190	0.37	+0.0
3,549,403	+		PS417_16190	0.53	-1.7
3,549,403	+		PS417_16190	0.53	+1.1
3,549,404	-		PS417_16190	0.54	+1.2
3,549,555	-		PS417_16190	0.69	+0.3
3,549,555	-		PS417_16190	0.69	+0.7
3,549,569	+		PS417_16190	0.70	-0.3
3,549,570	-		PS417_16190	0.70	+1.8
3,549,570	-		PS417_16190	0.70	-1.0
3,549,570	-		PS417_16190	0.70	-1.0
3,549,570	-		PS417_16190	0.70	+1.3