Strain Fitness in Pseudomonas simiae WCS417 around PS417_16105

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
3,530,084	+		PS417_16100	0.20	-0.0
3,530,359	+		PS417_16100	0.67	-1.2
3,530,359	+		PS417_16100	0.67	-1.0
3,530,402	-		PS417_16100	0.74	+0.2
3,530,402	-		PS417_16100	0.74	-0.4
3,530,402	-		PS417_16100	0.74	+2.3
3,530,469	-		PS417_16100	0.86	+0.9
3,530,627	+				-0.8
3,530,627	+				-1.9
3,530,628	-				+2.0
3,530,628	-				+0.2
3,530,700	-				-0.6
3,530,758	+				+0.2
3,530,758	+				+1.3
3,530,758	+				+0.3
3,530,759	-				+1.1
3,530,993	+				+0.9
3,531,314	-		PS417_16105	0.37	-0.9
3,531,314	-				+1.3
3,531,596	+		PS417_16105	0.68	-1.4
3,531,919	+				+0.3
3,531,919	+				-0.1
3,531,920	-				-0.4
3,532,040	+				-1.8
3,532,109	+				-0.2
3,532,110	-				+1.0
3,532,110	-				+0.9
3,532,406	-		PS417_16110	0.79	+0.6
3,532,459	-				-2.9
3,532,459	-				+0.3
3,532,466	-				+0.2
3,532,511	-				-2.4
3,532,770	-				-1.8
3,532,821	-				-0.5