Strain Fitness in Pseudomonas simiae WCS417 around PS417_16045

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
3,515,418	+		PS417_16035	0.27	+0.2
3,515,419	-		PS417_16035	0.27	+1.7
3,515,419	-		PS417_16035	0.27	-0.7
3,515,790	+		PS417_16035	0.65	-0.6
3,515,790	+		PS417_16035	0.65	-2.1
3,515,791	-		PS417_16035	0.65	-1.3
3,515,869	-		PS417_16035	0.73	+0.3
3,516,765	+		PS417_16045	0.41	-1.5
3,517,050	+		PS417_16045	0.65	+0.7
3,517,258	-		PS417_16045	0.83	-1.1
3,517,334	+		PS417_16045	0.89	+1.5
3,517,403	-				-0.3
3,517,452	-				+1.9
3,517,452	-				-0.3
3,517,526	+				-0.4
3,517,559	-				+0.6
3,517,664	+				-0.6
3,517,664	+				+1.9
3,518,243	-		PS417_16050	0.75	-0.8
3,518,256	+		PS417_16050	0.77	+0.8