Strain Fitness in Pseudomonas simiae WCS417 around PS417_15970

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
3,499,630	-				+0.3
3,499,630	-				+1.6
3,499,657	-				-0.2
3,499,746	+				+1.5
3,499,746	+				-0.2
3,499,746	+				-0.2
3,499,746	+				-0.2
3,499,746	+				-0.4
3,499,746	+				-0.8
3,499,747	-				+2.4
3,499,790	+				+0.1
3,499,790	+				-0.1
3,499,790	+				+0.7
3,499,791	-				+0.6
3,499,817	+				-1.5
3,499,826	+				-1.8
3,499,827	-				+1.3
3,499,870	+				+0.7
3,499,907	-				-0.2
3,499,974	-				-0.7
3,499,974	-				+0.3
3,500,117	-				-1.4
3,500,255	+				-1.0
3,500,259	+				-0.3
3,500,260	-				+0.5
3,500,260	-				-0.2
3,500,419	+		PS417_15970	0.17	-1.3
3,500,420	-				+1.3
3,500,466	+		PS417_15970	0.29	-2.4
3,500,520	+		PS417_15970	0.41	-1.0
3,500,521	-		PS417_15970	0.42	-0.2
3,500,630	-		PS417_15970	0.68	-0.5
3,500,634	-		PS417_15970	0.69	+0.2
3,500,634	-		PS417_15970	0.69	-1.4
3,500,634	-		PS417_15970	0.69	-0.7
3,500,899	-				+0.9
3,500,951	+				-0.3
3,500,970	+				-2.9
3,500,970	+				-0.2
3,501,109	+				+1.3
3,501,403	-				+1.3
3,501,403	-		PS417_15975	0.43	-0.9
3,501,662	+		PS417_15975	0.64	-1.5
3,501,711	-		PS417_15975	0.68	+2.6