Strain Fitness in Pseudomonas simiae WCS417 around PS417_15915

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
3,483,945	+		PS417_15905	0.62	-0.1
3,483,986	+		PS417_15905	0.67	-0.5
3,483,986	+		PS417_15905	0.67	-0.2
3,483,986	+				+2.0
3,484,237	+				-0.7
3,484,237	+				+0.8
3,484,238	-				+0.6
3,484,238	-				+0.1
3,484,238	-				-0.8
3,484,238	-				+1.0
3,484,241	+				-0.2
3,484,565	+		PS417_15910	0.58	+0.3
3,484,566	-		PS417_15910	0.58	-0.2
3,484,664	-		PS417_15910	0.75	+0.4
3,484,664	-		PS417_15910	0.75	-0.2
3,484,926	+				+1.9
3,484,926	+				+2.3
3,484,926	+				-0.8
3,485,107	+		PS417_15915	0.60	-1.7
3,485,108	-		PS417_15915	0.60	-0.0
3,485,513	-		PS417_15920	0.52	+0.2