Strain Fitness in Pseudomonas simiae WCS417 around PS417_15665

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
3,433,012	+		PS417_15655	0.64	+1.7
3,433,013	-		PS417_15655	0.64	-0.2
3,433,013	-		PS417_15655	0.64	-0.5
3,433,046	-		PS417_15655	0.80	-0.1
3,433,046	-		PS417_15655	0.80	-1.9
3,433,071	+				-0.1
3,433,071	+				+0.9
3,433,072	-				-0.3
3,433,073	+				-1.7
3,433,073	+				+0.4
3,433,073	+				+0.8
3,433,074	-				-0.7
3,433,074	-				-1.3
3,433,394	-				+0.5
3,433,560	+		PS417_15660	0.43	+2.9
3,433,560	+		PS417_15660	0.43	+0.6
3,433,560	+		PS417_15660	0.43	+0.9
3,433,560	+		PS417_15660	0.43	+0.6
3,433,561	-		PS417_15660	0.44	+0.6
3,433,561	-		PS417_15660	0.44	-0.4
3,433,561	-				-0.3
3,433,725	-		PS417_15660	0.78	+0.4
3,433,856	-				-0.3
3,434,077	+		PS417_15665	0.65	-2.0
3,434,132	-		PS417_15665	0.85	+1.3
3,434,152	+				+0.7
3,434,153	-				+0.2
3,434,226	+		PS417_15670	0.30	+1.0
3,434,227	-		PS417_15670	0.31	-1.9
3,434,406	+				-1.1
3,434,744	+		PS417_15675	0.13	-1.0