Strain Fitness in Pseudomonas simiae WCS417 around PS417_15435

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
3,381,687	+		PS417_15430	0.26	-1.0
3,381,779	+		PS417_15430	0.33	+0.4
3,381,779	+		PS417_15430	0.33	+0.9
3,381,780	-		PS417_15430	0.33	-0.9
3,381,987	-		PS417_15430	0.49	+0.2
3,382,005	-		PS417_15430	0.50	-0.8
3,382,007	+		PS417_15430	0.51	+0.0
3,382,007	+		PS417_15430	0.51	+0.7
3,382,007	+				-1.9
3,382,007	+		PS417_15430	0.51	-0.2
3,382,007	+		PS417_15430	0.51	+1.3
3,382,008	-		PS417_15430	0.51	+1.1
3,382,008	-		PS417_15430	0.51	+0.7
3,382,011	-		PS417_15430	0.51	-1.2
3,382,011	-		PS417_15430	0.51	-1.5
3,382,040	+		PS417_15430	0.53	-0.4
3,382,539	-				+0.9
3,382,692	+				-0.9
3,382,692	+				+1.5
3,382,713	+				-1.0
3,382,830	-		PS417_15435	0.20	+1.3
3,383,202	+		PS417_15435	0.64	-0.0
3,383,266	-		PS417_15435	0.72	-0.7
3,383,311	-		PS417_15435	0.77	-0.2
3,383,434	-				+0.3
3,383,504	-				+0.1
3,383,574	+				-1.1
3,383,574	+				-1.6
3,383,574	+				+0.3
3,383,728	-		PS417_15440	0.21	+0.7
3,383,868	+		PS417_15440	0.35	+0.8
3,383,869	-		PS417_15440	0.35	-0.8
3,384,282	+		PS417_15440	0.75	-0.5
3,384,283	-		PS417_15440	0.75	-1.1
3,384,283	-		PS417_15440	0.75	-2.7
3,384,283	-		PS417_15440	0.75	-1.0