Strain Fitness in Pseudomonas simiae WCS417 around PS417_15210

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
3,334,553	+		PS417_15205	0.42	+0.3
3,334,558	+		PS417_15205	0.43	-1.3
3,334,558	+				+0.3
3,334,594	+		PS417_15205	0.45	-0.3
3,334,610	+		PS417_15205	0.46	-0.3
3,334,611	-		PS417_15205	0.46	-2.3
3,334,661	+		PS417_15205	0.50	-1.5
3,334,919	+		PS417_15205	0.68	-1.6
3,335,039	+		PS417_15205	0.76	+1.3
3,335,040	-		PS417_15205	0.76	+2.3
3,335,113	+		PS417_15205	0.81	-0.1
3,335,114	-		PS417_15205	0.81	+1.1
3,335,135	-		PS417_15205	0.82	-1.5
3,335,135	-		PS417_15205	0.82	+2.3
3,335,166	-		PS417_15205	0.85	+2.3
3,335,215	+				+1.3
3,335,215	+		PS417_15205	0.88	-0.5
3,335,215	+		PS417_15205	0.88	-1.2
3,335,216	-		PS417_15205	0.88	+0.3
3,335,216	-		PS417_15205	0.88	-0.8
3,335,384	+				+0.0
3,335,384	+				-0.5
3,335,384	+				+1.3
3,335,385	-				+0.2
3,335,402	+				+1.0
3,335,402	+				-0.0
3,335,402	+				+2.1
3,335,403	-				-1.4
3,335,405	+				-2.0
3,335,405	+				-0.4
3,335,405	+				+0.7
3,335,405	+				-0.2
3,335,405	+				-1.0
3,335,406	-				-1.2
3,335,406	-				+3.6
3,335,406	-				+1.4
3,335,408	+				-0.3
3,335,408	+				-0.2
3,335,409	-				+0.9
3,335,566	+				-0.6
3,335,567	-				+1.2
3,335,940	-		PS417_15210	0.85	+0.7
3,336,183	+				-0.2
3,336,261	+		PS417_15215	0.23	+2.4
3,336,436	+		PS417_15215	0.58	+0.3
3,336,581	+		PS417_15215	0.87	+0.9
3,336,648	-				+1.0
3,336,648	-				+2.4
3,336,751	+				+0.7
3,336,764	+				+0.0
3,336,800	+				-0.5
3,336,914	+		PS417_15220	0.11	-0.2
3,336,914	+		PS417_15220	0.11	-3.0
3,336,914	+		PS417_15220	0.11	+1.4
3,336,915	-		PS417_15220	0.11	-0.0
3,336,987	-		PS417_15220	0.17	+1.1
3,336,987	-		PS417_15220	0.17	-1.8
3,336,990	+		PS417_15220	0.17	-0.7
3,336,990	+		PS417_15220	0.17	-0.8
3,336,991	-		PS417_15220	0.17	+0.1