Strain Fitness in Pseudomonas simiae WCS417 around PS417_14300

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
3,129,026	+		PS417_14295	0.51	+0.1
3,129,027	-		PS417_14295	0.51	-0.3
3,129,313	+		PS417_14295	0.89	-0.5
3,129,314	-		PS417_14295	0.89	-0.0
3,129,334	+				-1.6
3,129,334	+				-0.3
3,129,335	-				+2.3
3,129,538	+				-0.6
3,129,583	+				+0.4
3,129,583	+				-0.7
3,129,583	+				-0.2
3,129,767	+		PS417_14300	0.11	+1.0
3,129,768	-		PS417_14300	0.11	+0.4
3,129,921	-		PS417_14300	0.21	+0.1
3,130,075	-		PS417_14300	0.30	-1.3
3,130,217	+		PS417_14300	0.39	-0.7
3,130,323	-		PS417_14300	0.46	+0.4
3,130,458	-		PS417_14300	0.54	+0.1
3,130,509	-		PS417_14300	0.57	-2.6
3,130,509	-		PS417_14300	0.57	+0.7
3,130,509	-		PS417_14300	0.57	+1.8
3,130,509	-		PS417_14300	0.57	-2.8
3,130,536	-		PS417_14300	0.59	-0.1
3,130,536	-		PS417_14300	0.59	+1.3
3,130,536	-				-0.3
3,130,899	-		PS417_14300	0.81	+1.9
3,131,058	+				-0.7
3,131,087	+				-0.7
3,131,390	+		PS417_14305	0.19	+1.7
3,131,407	+				+0.3
3,131,677	+		PS417_14305	0.50	-2.4
3,131,908	+				-1.3
3,132,034	+		PS417_14305	0.88	-0.0
3,132,082	+				-0.2
3,132,083	-				+2.1
3,132,160	+				+0.3