Strain Fitness in Pseudomonas simiae WCS417 around PS417_14100

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
3,092,585	+		PS417_14085	0.23	-2.3
3,092,591	+		PS417_14085	0.25	-0.5
3,092,678	+				-0.3
3,092,740	+		PS417_14085	0.67	+0.4
3,092,740	+		PS417_14085	0.67	+0.9
3,092,740	+		PS417_14085	0.67	+0.4
3,092,856	-				+1.4
3,092,859	-				+1.1
3,092,879	+				+0.3
3,092,880	-				+2.3
3,092,880	-				+2.5
3,092,880	-				-0.3
3,092,916	-				-0.0
3,092,932	-				-0.6
3,092,944	-				-1.8
3,092,944	-				-0.4
3,092,944	-				-1.3
3,092,987	-				+1.4
3,093,142	-		PS417_14090	0.24	-0.7
3,093,413	+				-0.5
3,093,414	-				-0.0
3,093,417	+				+0.2
3,093,417	+				+1.9
3,093,652	+		PS417_14100	0.13	-0.4
3,093,652	+		PS417_14100	0.13	+0.3
3,093,653	-		PS417_14100	0.13	-0.6
3,093,655	+		PS417_14100	0.13	-0.5
3,093,756	-		PS417_14100	0.28	-2.2
3,093,955	-				+0.3
3,094,008	-		PS417_14100	0.66	-0.7
3,094,022	-		PS417_14100	0.68	-0.2
3,094,022	-		PS417_14100	0.68	-0.6
3,094,390	-				+0.0
3,094,390	-				+1.5
3,094,763	+		PS417_14105	0.43	+0.3
3,094,764	-		PS417_14105	0.43	+1.0
3,094,822	+		PS417_14105	0.49	+1.3