Strain Fitness in Pseudomonas simiae WCS417 around PS417_13725

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
3,016,766	+				+0.4
3,016,767	-				-1.6
3,016,767	-				-1.1
3,016,949	+				+0.5
3,016,949	+				-0.7
3,016,957	+				+0.6
3,016,957	+				+0.4
3,016,957	+				-0.1
3,016,957	+				-1.9
3,016,958	-				-2.7
3,016,960	-				+0.7
3,016,991	+				+0.9
3,016,991	+				+0.9
3,016,991	+				+2.2
3,016,995	+				+0.1
3,017,014	+		PS417_13715	0.14	-1.5
3,017,014	+		PS417_13715	0.14	+2.0
3,017,018	+		PS417_13715	0.16	-0.1
3,017,018	+				+0.3
3,017,018	+		PS417_13715	0.16	-1.7
3,017,038	+		PS417_13715	0.25	-1.0
3,017,125	+		PS417_13715	0.64	+0.2
3,017,126	-		PS417_13715	0.64	+0.6
3,017,259	-				+0.5
3,017,259	-				+1.0
3,017,337	+		PS417_13720	0.23	-0.7
3,017,396	+		PS417_13720	0.34	-1.5
3,017,397	-		PS417_13720	0.34	-1.1
3,017,397	-		PS417_13720	0.34	+0.7
3,017,397	-		PS417_13720	0.34	+0.0
3,017,682	+		PS417_13720	0.90	+0.6
3,017,726	+				-1.7
3,017,756	+				-0.3
3,017,774	-				+0.3
3,017,801	+		PS417_13725	0.13	-2.6
3,017,945	+		PS417_13725	0.45	+0.5
3,017,945	+		PS417_13725	0.45	-1.0
3,017,946	-		PS417_13725	0.46	-0.5
3,018,082	-		PS417_13725	0.76	-1.7
3,018,111	+		PS417_13725	0.83	-0.4
3,018,111	+		PS417_13725	0.83	+0.5
3,018,250	-				+0.6
3,018,275	-				-0.1
3,018,275	-				+3.6
3,018,275	-				-2.9
3,018,388	+		PS417_13730	0.48	+0.8
3,018,407	-		PS417_13730	0.56	+0.0
3,018,488	+		PS417_13730	0.90	+0.4
3,018,489	-				+1.3
3,018,658	+		PS417_13735	0.57	-0.4
3,018,659	-		PS417_13735	0.58	-0.0
3,018,743	-				-0.7
3,018,796	+				+1.1
3,018,797	-				-2.1
3,018,882	+				+3.9
3,019,097	-		PS417_13740	0.81	-0.2
3,019,097	-		PS417_13740	0.81	+3.9
3,019,097	-		PS417_13740	0.81	+1.7
3,019,117	+		PS417_13740	0.88	-1.4
3,019,118	-				-0.7
3,019,118	-		PS417_13740	0.89	-0.0
3,019,118	-		PS417_13740	0.89	-0.9
3,019,118	-		PS417_13740	0.89	+1.0
3,019,164	+				+0.2
3,019,166	+				-2.4
3,019,166	+				+0.3
3,019,166	+				-3.0