Strain Fitness in Pseudomonas simiae WCS417 around PS417_13565

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
2,987,774	+		PS417_13555	0.85	+0.3
2,987,795	+		PS417_13555	0.88	-1.4
2,987,795	+		PS417_13555	0.88	-2.8
2,987,795	+		PS417_13555	0.88	-2.0
2,987,796	-		PS417_13555	0.88	-1.3
2,987,796	-		PS417_13555	0.88	+0.2
2,987,823	-				-0.0
2,987,823	-				-0.3
2,987,899	+				-1.0
2,987,904	+				+0.2
2,987,904	+				-0.2
2,987,905	-				+1.0
2,988,048	+		PS417_13560	0.23	-0.4
2,988,100	-		PS417_13560	0.31	+1.3
2,988,163	-		PS417_13560	0.40	-0.4
2,988,183	+		PS417_13560	0.42	-1.4
2,988,184	-		PS417_13560	0.43	-0.3
2,988,219	+		PS417_13560	0.48	-1.3
2,988,219	+		PS417_13560	0.48	+2.0
2,988,471	+		PS417_13560	0.84	-0.2
2,988,471	+		PS417_13560	0.84	-0.7
2,988,471	+		PS417_13560	0.84	-0.2
2,988,472	-		PS417_13560	0.84	+4.4
2,988,502	-		PS417_13560	0.88	-1.5
2,988,502	-		PS417_13560	0.88	-2.4
2,988,681	-		PS417_13565	0.10	+0.9
2,988,839	+		PS417_13565	0.26	-0.4
2,988,840	-		PS417_13565	0.26	+0.4
2,988,840	-		PS417_13565	0.26	-0.7
2,988,885	-		PS417_13565	0.30	-1.6
2,989,012	+		PS417_13565	0.43	+2.7
2,989,069	+		PS417_13565	0.49	-0.0
2,989,070	-		PS417_13565	0.49	-1.8
2,989,070	-		PS417_13565	0.49	-2.2
2,989,073	+		PS417_13565	0.49	-0.3
2,989,074	-		PS417_13565	0.49	-3.0
2,989,074	-		PS417_13565	0.49	+0.1
2,989,074	-		PS417_13565	0.49	-0.0
2,989,074	-		PS417_13565	0.49	-1.3
2,989,304	+		PS417_13565	0.72	+0.1
2,989,675	-				+1.3
2,989,999	+				-1.0
2,990,142	-				-1.8
2,990,149	+				+1.6
2,990,310	+		PS417_13575	0.15	-0.6
2,990,374	+		PS417_13575	0.21	-0.3