Strain Fitness in Pseudomonas simiae WCS417 around PS417_13175

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
2,877,637	+		PS417_13170	0.24	-0.1
2,877,666	+		PS417_13170	0.26	-1.0
2,877,666	+		PS417_13170	0.26	+1.9
2,877,666	+		PS417_13170	0.26	+0.7
2,877,666	+		PS417_13170	0.26	-1.4
2,877,667	-		PS417_13170	0.27	+0.4
2,877,827	-		PS417_13170	0.40	+1.1
2,877,971	-		PS417_13170	0.52	-0.5
2,878,063	+		PS417_13170	0.59	-0.2
2,878,199	-		PS417_13170	0.71	+0.6
2,878,450	+				-0.4
2,878,451	-				+0.4
2,878,538	+				-2.9
2,878,634	+				+0.3
2,878,643	+				-0.2
2,878,889	+		PS417_13175	0.39	-2.2
2,878,890	-		PS417_13175	0.39	-1.2
2,878,890	-		PS417_13175	0.39	-2.0
2,879,321	+				-0.4
2,879,413	+				-1.1
2,879,414	-				-0.7
2,879,418	-				+1.9
2,879,418	-				+2.0
2,879,418	-				-0.1
2,879,425	+				+0.1
2,879,609	-				+2.3
2,880,033	-		PS417_13180	0.46	+0.3
2,880,033	-		PS417_13180	0.46	-1.2
2,880,225	-		PS417_13180	0.65	-0.1