Strain Fitness in Pseudomonas simiae WCS417 around PS417_12535

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
2,725,852	+				+0.0
2,725,852	+				+0.2
2,725,853	-				-1.6
2,726,081	+		PS417_12530	0.26	+0.1
2,726,237	+		PS417_12530	0.44	-2.2
2,726,238	-		PS417_12530	0.44	+0.3
2,726,452	-		PS417_12530	0.68	-0.1
2,726,589	+		PS417_12530	0.83	+0.6
2,726,589	+		PS417_12530	0.83	-2.7
2,726,589	+		PS417_12530	0.83	+0.9
2,726,589	+		PS417_12530	0.83	-0.2
2,726,590	-		PS417_12530	0.83	-0.4
2,726,590	-		PS417_12530	0.83	-1.5
2,726,590	-		PS417_12530	0.83	-1.1
2,726,805	+				+0.1
2,726,904	-				+1.6
2,726,904	-				+0.5
2,727,049	+		PS417_12535	0.24	-1.2
2,727,353	+		PS417_12535	0.57	-1.0
2,727,353	+		PS417_12535	0.57	-0.9
2,727,657	-				-0.8
2,727,657	-				+0.2
2,727,734	+				-0.1
2,727,734	+				+0.9
2,727,882	+		PS417_12540	0.20	-0.6
2,727,883	-		PS417_12540	0.21	+0.7
2,728,068	+		PS417_12540	0.61	-3.3
2,728,253	+				-0.1
2,728,253	+				-0.1
2,728,253	+				-0.1
2,728,254	-				-0.9
2,728,254	-				+1.3
2,728,254	-				+0.3
2,728,263	+				+0.0
2,728,263	+				-1.7
2,728,338	-				-1.5
2,728,668	+		PS417_12545	0.28	-0.7