Strain Fitness in Pseudomonas simiae WCS417 around PS417_12485

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
2,714,144	+		PS417_12475	0.74	+0.9
2,714,145	-		PS417_12475	0.74	+0.3
2,714,196	-		PS417_12475	0.81	-0.2
2,714,216	-		PS417_12475	0.84	-0.3
2,714,282	-				-1.5
2,714,282	-				-0.9
2,714,364	+				+0.6
2,714,600	+		PS417_12480	0.33	-2.5
2,714,600	+				+2.7
2,714,601	-		PS417_12480	0.33	+0.0
2,714,626	+		PS417_12480	0.37	-0.5
2,714,645	+		PS417_12480	0.39	-0.4
2,714,714	+		PS417_12480	0.49	-0.8
2,714,781	+		PS417_12480	0.59	+0.1
2,714,785	+		PS417_12480	0.60	-2.1
2,714,785	+		PS417_12480	0.60	+1.3
2,714,852	+		PS417_12480	0.70	+0.1
2,714,944	-		PS417_12480	0.83	-0.8
2,715,086	-				+1.0
2,715,209	+				+0.3
2,715,267	-		PS417_12485	0.20	+2.5
2,715,270	+		PS417_12485	0.20	-2.0
2,715,271	-		PS417_12485	0.21	+0.6
2,715,318	+		PS417_12485	0.27	+1.9
2,715,561	+		PS417_12485	0.60	+0.2
2,715,561	+		PS417_12485	0.60	+0.4
2,715,652	+				-0.3
2,715,725	+		PS417_12485	0.82	-0.0
2,715,726	-				-0.3
2,715,875	+				+0.7
2,715,887	+				+1.1
2,715,887	+				-0.8
2,715,915	-				+0.9
2,715,926	-				-1.3
2,716,384	+		PS417_12490	0.83	+1.0
2,716,384	+		PS417_12490	0.83	-0.0
2,716,384	+				-1.3
2,716,476	+				-2.2
2,716,476	+				+0.2
2,716,477	-				+1.3
2,716,794	+		PS417_12495	0.71	+0.0
2,716,794	+		PS417_12495	0.71	+0.2
2,716,794	+		PS417_12495	0.71	-1.3
2,716,795	-		PS417_12495	0.71	+0.1
2,716,795	-		PS417_12495	0.71	+0.9
2,716,808	+		PS417_12495	0.74	-0.8
2,716,809	-		PS417_12495	0.74	-0.4
2,716,809	-		PS417_12495	0.74	+0.1