Strain Fitness in Pseudomonas simiae WCS417 around PS417_12465

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
2,709,877	+		PS417_12455	0.68	-2.6
2,710,080	+				-0.4
2,710,081	-				+0.3
2,710,119	+				+0.6
2,710,151	+				+0.4
2,710,206	-				-2.3
2,710,206	-				-0.5
2,710,209	+				-0.7
2,710,210	-				-0.4
2,710,300	-		PS417_12460	0.37	-0.9
2,710,301	+		PS417_12460	0.37	+0.8
2,710,301	+		PS417_12460	0.37	-1.0
2,710,302	-		PS417_12460	0.38	+0.8
2,710,302	-		PS417_12460	0.38	+2.0
2,710,302	-		PS417_12460	0.38	+1.4
2,710,302	-		PS417_12460	0.38	-0.6
2,710,326	+		PS417_12460	0.47	-2.1
2,710,528	+				-0.3
2,710,529	-				+0.1
2,710,534	+				+1.7
2,710,535	-				+1.3
2,710,698	-				+0.4
2,710,700	-				-1.2
2,710,761	+				+0.1
2,710,762	-				-1.7
2,710,973	-				+1.7
2,711,057	+		PS417_12465	0.19	+1.3
2,711,110	-		PS417_12465	0.23	-1.9
2,711,189	-		PS417_12465	0.29	-1.1
2,711,544	-		PS417_12465	0.56	-0.2
2,711,544	-		PS417_12465	0.56	-0.4
2,711,693	-		PS417_12465	0.67	-0.2
2,711,693	-		PS417_12465	0.67	-1.6
2,711,753	+		PS417_12465	0.71	+1.3
2,711,753	+		PS417_12465	0.71	-0.3
2,711,753	+		PS417_12465	0.71	-1.4
2,711,786	-		PS417_12465	0.74	-2.2
2,711,927	+		PS417_12465	0.84	-1.5
2,711,927	+		PS417_12465	0.84	-0.4
2,711,927	+		PS417_12465	0.84	+1.1
2,711,927	+		PS417_12465	0.84	-0.3
2,711,928	-		PS417_12465	0.85	-0.6
2,711,928	-		PS417_12465	0.85	+0.6
2,711,928	-		PS417_12465	0.85	-1.9
2,711,983	-		PS417_12465	0.89	-0.1
2,712,249	-				-1.0
2,712,249	-				-1.2
2,712,365	+				+1.3
2,712,465	+				-0.3
2,712,493	+		PS417_12470	0.19	-0.3
2,712,591	+		PS417_12470	0.27	+2.0
2,712,599	+		PS417_12470	0.27	-1.1
2,712,704	+		PS417_12470	0.36	+1.4
2,712,704	+		PS417_12470	0.36	+1.3
2,712,705	-		PS417_12470	0.36	-1.5
2,712,705	-		PS417_12470	0.36	-0.3
2,712,705	-		PS417_12470	0.36	+1.0
2,712,859	-		PS417_12470	0.47	-1.7
2,712,923	+		PS417_12470	0.52	+0.2
2,712,987	-		PS417_12470	0.57	+2.0
2,713,041	+		PS417_12470	0.61	-0.1
2,713,056	+		PS417_12470	0.63	+0.4
2,713,056	+		PS417_12470	0.63	-0.1
2,713,057	-		PS417_12470	0.63	-1.0
2,713,112	+		PS417_12470	0.67	-0.7
2,713,112	+		PS417_12470	0.67	+0.1