Strain Fitness in Pseudomonas simiae WCS417 around PS417_12355

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
2,687,141	-		PS417_12350	0.75	-1.7
2,687,404	-		PS417_12350	0.82	-4.4
2,687,490	+		PS417_12350	0.84	-0.3
2,687,616	+		PS417_12350	0.88	+1.0
2,687,616	+		PS417_12350	0.88	+0.3
2,687,616	+		PS417_12350	0.88	-1.7
2,687,617	-		PS417_12350	0.88	-1.3
2,687,617	-		PS417_12350	0.88	+1.0
2,687,617	-		PS417_12350	0.88	-0.9
2,687,805	+				-0.3
2,687,806	-				+0.2
2,688,064	+				-0.7
2,688,065	-				-2.0
2,688,065	-				-0.4
2,688,065	-				-1.1
2,688,065	-				+1.3
2,688,078	+				+0.3
2,688,442	+		PS417_12355	0.31	-1.5
2,688,443	-		PS417_12355	0.31	-0.8
2,688,939	+		PS417_12355	0.80	-1.3
2,688,940	-		PS417_12355	0.80	-3.1
2,689,294	-		PS417_12360	0.18	-2.5
2,689,775	+				-1.7
2,689,789	-				-0.2
2,689,890	+				-0.1
2,689,891	-				+0.0
2,689,891	-				+1.3