Strain Fitness in Pseudomonas simiae WCS417 around PS417_12300

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
2,670,496	+		PS417_12290	0.66	+0.1
2,670,784	+		PS417_12290	0.84	-0.7
2,670,784	+		PS417_12290	0.84	+0.1
2,670,785	-		PS417_12290	0.84	-0.3
2,670,920	+				-1.3
2,670,921	-				+0.6
2,670,980	+				-0.1
2,671,048	+				+1.4
2,671,048	+				-0.9
2,671,048	+				+0.5
2,671,049	-				+0.2
2,671,049	-				-0.6
2,671,049	-				-0.8
2,671,052	+				+1.2
2,671,052	+				-0.3
2,671,052	+				-0.4
2,671,052	+				-0.8
2,671,052	+				-0.7
2,671,052	+				+0.4
2,671,052	+				-1.7
2,671,052	+				-0.1
2,671,052	+				+0.5
2,671,052	+				-0.2
2,671,052	+				-0.2
2,671,053	-				-0.4
2,671,053	-				+0.1
2,671,053	-				+0.3
2,671,053	-				-0.1
2,671,053	-				-1.0
2,671,053	-				-2.5
2,671,053	-				-0.5
2,671,053	-				-0.4
2,671,056	+				+1.3
2,671,056	+				-1.1
2,671,056	+				-0.4
2,671,056	+				-0.7
2,671,056	+				+0.4
2,671,056	+				+0.3
2,671,056	+				+1.3
2,671,056	+				-0.6
2,671,057	-				+0.7
2,671,057	-				-0.7
2,671,057	-				+0.4
2,671,057	-				+1.3
2,671,057	-				-0.7
2,671,057	-				+1.9
2,671,057	-				+0.1
2,671,057	-				-0.7
2,671,057	-				+0.9
2,671,058	+				-0.9
2,671,058	+				+0.2
2,671,058	+				+2.8
2,671,058	+				+0.3
2,671,058	+				-1.5
2,671,058	+				-0.3
2,671,058	+				-0.4
2,671,059	-				+0.3
2,671,059	-				-0.5
2,671,121	+				+0.0
2,671,168	+				-1.1
2,671,236	+				-1.0
2,671,257	+				+0.0
2,671,258	-				+0.2
2,671,331	-				-0.3
2,671,331	-				-0.1
2,671,433	+				-2.4
2,671,645	+		PS417_12300	0.17	-0.0
2,671,718	-		PS417_12300	0.23	+1.4
2,671,741	+		PS417_12300	0.26	+3.9
2,671,741	+		PS417_12300	0.26	+1.5
2,671,741	+		PS417_12300	0.26	+0.5
2,671,741	+		PS417_12300	0.26	+0.2
2,671,742	-		PS417_12300	0.26	+0.9
2,671,742	-				+0.3
2,671,803	+		PS417_12300	0.31	+0.1
2,672,287	-				+0.3
2,672,616	+		PS417_12305	0.38	-1.7
2,672,750	+				-0.7
2,672,750	+				-0.9
2,672,750	+				+1.3
2,672,750	+				-3.1
2,672,750	+				+0.7
2,672,750	+				+1.1
2,672,750	+				-0.7
2,672,750	+				+2.3
2,672,750	+				-0.4
2,672,750	+				+0.3
2,672,751	-				+0.4
2,672,751	-				-0.1
2,672,751	-				+0.7
2,672,751	-				+2.6
2,672,751	-				+0.7
2,672,751	-				+0.8
2,672,786	-				+0.0
2,672,786	-				+0.2
2,672,786	-				+0.3
2,672,786	-				+0.1
2,672,804	+				+0.3
2,672,804	+				-1.2
2,672,804	+				-0.2
2,672,805	-				-1.2
2,672,805	-				+0.1
2,672,805	-				+1.6
2,672,819	+				-0.3
2,672,819	+				-1.0
2,672,820	-				-0.3
2,672,891	+				-0.3
2,672,933	+				-1.1
2,672,957	+				-1.0
2,672,958	-				-0.3
2,672,993	+				+0.9
2,673,334	-		PS417_12310	0.14	+0.3