Strain Fitness in Pseudomonas simiae WCS417 around PS417_12280

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
2,667,505	+		PS417_12275	0.32	-1.9
2,667,506	-		PS417_12275	0.32	-0.3
2,667,824	-		PS417_12275	0.58	-0.1
2,668,216	+		PS417_12275	0.90	+1.9
2,668,216	+		PS417_12275	0.90	+0.3
2,668,217	-		PS417_12275	0.90	+0.6
2,668,217	-		PS417_12275	0.90	+1.2
2,668,217	-		PS417_12275	0.90	-0.1
2,668,289	+				-0.9
2,668,377	-				+0.7
2,668,382	+				-1.5
2,668,395	-				+0.1
2,668,472	+		PS417_12280	0.14	-1.3
2,668,529	+		PS417_12280	0.28	-0.9
2,668,791	+				+0.8
2,668,791	+				+1.3
2,668,966	+				-1.3
2,668,966	+				-0.3
2,668,966	+				-0.3
2,669,453	+				-0.7
2,669,495	+				-2.4
2,669,495	+				-0.0
2,669,496	-				-0.1
2,669,609	+		PS417_12290	0.13	-0.4
2,669,726	+				+1.3