Strain Fitness in Pseudomonas simiae WCS417 around PS417_11825

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
2,572,055	+		PS417_11820	0.30	+0.6
2,572,055	+		PS417_11820	0.30	+1.1
2,572,141	-		PS417_11820	0.36	+0.4
2,572,920	-				-0.0
2,572,923	-				-0.2
2,572,923	-				+0.1
2,572,970	+				+0.1
2,573,011	-				-0.3
2,573,046	-				+0.3
2,573,046	-				+1.3
2,573,220	+				+2.7
2,573,398	-		PS417_11825	0.57	-1.2
2,573,609	+		PS417_11825	0.88	-1.3
2,573,610	-		PS417_11825	0.88	-2.0
2,573,610	-		PS417_11825	0.88	-0.5
2,573,683	+				-1.4
2,573,696	-				-0.1
2,573,699	-				-0.9
2,573,752	-				+0.0
2,573,994	+				-0.3
2,573,995	-				-0.5
2,573,995	-				+0.3
2,574,325	+		PS417_11830	0.33	+0.2
2,574,526	+		PS417_11830	0.55	+1.7
2,574,526	+		PS417_11830	0.55	-1.3
2,574,656	-		PS417_11830	0.69	-1.9