Strain Fitness in Pseudomonas simiae WCS417 around PS417_11680

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
2,512,206	+				-1.0
2,512,206	+				+0.2
2,512,206	+				-0.8
2,512,914	+				+0.4
2,512,980	-				+0.6
2,513,105	-				-1.3
2,513,216	-		PS417_11680	0.14	+1.3
2,513,216	-		PS417_11680	0.14	-1.5
2,513,216	-		PS417_11680	0.14	+0.8
2,513,588	-		PS417_11680	0.46	+0.6
2,513,815	-		PS417_11680	0.65	-0.8
2,513,815	-		PS417_11680	0.65	+2.2
2,514,232	-				-0.2
2,514,232	-				+2.1
2,514,427	-				+0.7
2,514,429	+				+0.0
2,514,469	+				-1.0
2,514,470	-				+1.4
2,514,609	+				-0.7
2,514,610	-				-0.5
2,514,709	+				-0.4
2,514,943	+				-0.7
2,514,944	-				-1.8
2,514,944	-				-2.9