Strain Fitness in Pseudomonas simiae WCS417 around PS417_11550

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
2,482,402	+		PS417_11545	0.29	-0.1
2,482,741	+		PS417_11545	0.62	-0.2
2,482,742	-		PS417_11545	0.62	-1.2
2,482,867	+		PS417_11545	0.75	+0.5
2,483,117	+				-0.3
2,483,511	+		PS417_11550	0.33	+0.3
2,483,511	+		PS417_11550	0.33	-2.0
2,483,599	+		PS417_11550	0.41	-0.6
2,484,003	+		PS417_11550	0.78	-1.1
2,484,071	+				-2.0
2,484,071	+		PS417_11550	0.84	-0.8
2,484,072	-		PS417_11550	0.85	-1.4
2,484,111	+		PS417_11550	0.88	+1.1
2,484,224	+				+0.3
2,484,708	-		PS417_11555	0.35	-1.4
2,484,968	+		PS417_11555	0.54	-0.3
2,484,969	-		PS417_11555	0.54	+0.4
2,485,100	+		PS417_11555	0.64	-2.9
2,485,190	+		PS417_11555	0.71	-0.7