Strain Fitness in Pseudomonas simiae WCS417 around PS417_11540

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
2,480,288	-		PS417_11535	0.21	-1.0
2,480,341	+		PS417_11535	0.25	-1.5
2,480,373	+		PS417_11535	0.28	-0.7
2,480,503	+		PS417_11535	0.38	+0.3
2,480,664	+		PS417_11535	0.52	-1.0
2,480,885	-		PS417_11535	0.70	-0.4
2,480,885	-		PS417_11535	0.70	+1.8
2,481,211	+				-1.1
2,481,212	-				-0.8
2,481,926	+		PS417_11540	0.83	-2.0
2,481,926	+		PS417_11540	0.83	-1.7
2,481,926	+		PS417_11540	0.83	-0.3
2,481,927	-		PS417_11540	0.83	-2.3
2,481,932	+		PS417_11540	0.84	-1.4
2,481,933	-		PS417_11540	0.84	+0.4
2,481,945	-		PS417_11540	0.85	+1.1
2,482,061	+				+1.4
2,482,061	+				+3.3
2,482,402	+		PS417_11545	0.29	-0.1
2,482,741	+		PS417_11545	0.62	-0.2
2,482,742	-		PS417_11545	0.62	-1.2
2,482,867	+		PS417_11545	0.75	+0.5