Strain Fitness in Pseudomonas simiae WCS417 around PS417_11300

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
2,418,739	+		PS417_11295	0.84	+0.5
2,418,739	+		PS417_11295	0.84	+1.3
2,418,911	+				-0.7
2,418,912	-				+0.4
2,418,943	+				-1.2
2,418,944	-				+0.6
2,418,967	+				+0.1
2,419,003	+				+1.3
2,419,121	+				+1.3
2,419,121	+				+0.9
2,419,122	-				-0.2
2,419,122	-				-0.2
2,419,122	-				-1.7
2,419,361	+				-1.0
2,419,436	+				-1.0
2,419,437	-				-1.8
2,419,437	-				+1.2
2,419,437	-				-1.0
2,419,437	-				+0.3
2,419,437	-				-0.1
2,419,437	-				-0.1
2,419,468	+				+0.1
2,419,469	-				+0.2
2,419,531	+				+0.6
2,419,703	-		PS417_11300	0.17	-0.5
2,419,703	-		PS417_11300	0.17	-0.5
2,419,728	-		PS417_11300	0.19	-1.4
2,419,728	-		PS417_11300	0.19	-1.5
2,420,230	-		PS417_11300	0.54	-0.9
2,420,894	+				+1.1
2,421,269	+		PS417_11305	0.32	-0.6
2,421,339	-		PS417_11305	0.38	+0.0
2,421,443	+		PS417_11305	0.47	+0.3
2,421,444	-		PS417_11305	0.47	-2.1
2,421,444	-		PS417_11305	0.47	+0.9
2,421,444	-		PS417_11305	0.47	+0.3
2,421,597	-		PS417_11305	0.59	-0.4