Strain Fitness in Pseudomonas simiae WCS417 around PS417_11000

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
2,355,423	-				+1.9
2,355,433	-				-0.2
2,355,477	+				+0.8
2,355,714	+		PS417_10995	0.28	-1.7
2,355,715	-		PS417_10995	0.28	+0.3
2,356,037	+		PS417_10995	0.73	-1.1
2,356,101	-		PS417_10995	0.82	-2.2
2,356,237	+				-0.3
2,356,271	+				-0.7
2,356,271	+				+1.3
2,356,272	-				-0.4
2,356,761	-		PS417_11000	0.28	+0.3
2,356,761	-				+0.8
2,356,935	-		PS417_11000	0.38	+0.5
2,357,057	+		PS417_11000	0.45	-0.9
2,357,314	-		PS417_11000	0.59	+2.7
2,357,327	+		PS417_11000	0.60	+0.7
2,357,701	+				-0.7
2,357,702	-		PS417_11000	0.82	+0.7
2,357,702	-		PS417_11000	0.82	-0.8
2,358,232	-				+0.3
2,358,232	-				+0.9
2,358,395	-		PS417_11005	0.14	-0.4
2,358,526	+		PS417_11005	0.24	-2.5
2,358,584	-		PS417_11005	0.28	+0.3
2,358,586	+		PS417_11005	0.28	+1.0
2,358,586	+		PS417_11005	0.28	-0.5
2,358,654	+		PS417_11005	0.33	-1.3
2,358,790	+		PS417_11005	0.44	-1.2
2,358,953	-		PS417_11005	0.56	-2.4
2,358,977	-		PS417_11005	0.58	-0.8