Strain Fitness in Pseudomonas simiae WCS417 around PS417_10985

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
2,351,031	+		PS417_10970	0.86	-1.5
2,351,031	+		PS417_10970	0.86	+0.1
2,351,120	-				-0.2
2,351,194	-				+0.1
2,351,332	+				-0.7
2,351,348	-				-1.7
2,351,870	-				+0.3
2,351,893	+				-0.7
2,351,893	+				-0.4
2,352,031	+				-0.1
2,352,050	+				+2.3
2,352,050	+				+2.3
2,352,051	-				+1.0
2,352,051	-				+1.0
2,352,051	-				-1.8
2,352,188	-		PS417_10985	0.20	-1.0
2,352,680	+				-0.2
2,352,978	-				-0.2
2,353,072	-				+0.3
2,353,171	-				+1.4
2,353,200	+				+0.2
2,353,365	-				+1.6
2,353,713	-		PS417_10990	0.22	-2.1
2,353,876	+		PS417_10990	0.30	+0.4