Strain Fitness in Pseudomonas simiae WCS417 around PS417_10940

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
2,339,752	+		PS417_10935	0.51	+0.6
2,339,902	+		PS417_10935	0.61	+1.3
2,339,902	+		PS417_10935	0.61	+1.3
2,339,902	+		PS417_10935	0.61	+0.3
2,340,562	+				+0.6
2,340,628	-		PS417_10940	0.12	-3.4
2,340,639	+		PS417_10940	0.13	-0.3
2,340,640	-		PS417_10940	0.13	+0.2
2,340,640	-		PS417_10940	0.13	+0.3
2,340,640	-		PS417_10940	0.13	-0.2
2,340,715	-		PS417_10940	0.21	-2.5
2,341,059	+		PS417_10940	0.55	-0.2
2,341,064	-		PS417_10940	0.56	-0.6
2,341,134	+		PS417_10940	0.63	-1.0
2,341,135	-		PS417_10940	0.63	-0.7
2,341,171	-		PS417_10940	0.66	-0.7
2,341,254	-				+1.3
2,341,368	+		PS417_10940	0.86	+0.1
2,341,511	-				-1.2
2,341,524	-				-2.2
2,341,617	-				+0.5
2,341,844	-		PS417_10945	0.18	+0.3
2,341,922	+		PS417_10945	0.24	-1.2
2,342,159	+				-1.8
2,342,201	+		PS417_10945	0.45	-0.3
2,342,375	+		PS417_10945	0.58	-0.7
2,342,375	+		PS417_10945	0.58	+2.7
2,342,375	+		PS417_10945	0.58	-0.4