Strain Fitness in Pseudomonas simiae WCS417 around PS417_10700

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
2,286,246	-		PS417_10695	0.58	+1.3
2,286,494	+		PS417_10695	0.73	-0.9
2,286,494	+		PS417_10695	0.73	+0.3
2,286,495	-		PS417_10695	0.73	+0.1
2,286,641	+		PS417_10695	0.82	-1.2
2,286,641	+		PS417_10695	0.82	-3.3
2,286,642	-		PS417_10695	0.82	-1.0
2,286,852	+				+0.5
2,287,196	+		PS417_10700	0.26	+0.3
2,287,203	+		PS417_10700	0.27	-0.4
2,287,203	+		PS417_10700	0.27	+1.3
2,287,203	+		PS417_10700	0.27	+1.0
2,287,203	+		PS417_10700	0.27	+1.0
2,287,203	+		PS417_10700	0.27	+0.5
2,287,204	-		PS417_10700	0.27	-1.7
2,287,205	+		PS417_10700	0.27	-1.5
2,287,206	-		PS417_10700	0.27	+1.0
2,287,256	-		PS417_10700	0.34	+1.0
2,287,400	+		PS417_10700	0.55	-1.8
2,287,465	+		PS417_10700	0.64	-1.5
2,287,465	+		PS417_10700	0.64	-0.7
2,287,505	-		PS417_10700	0.70	+1.3
2,287,538	+		PS417_10700	0.74	+1.3
2,287,586	+		PS417_10700	0.81	-1.8
2,287,587	-		PS417_10700	0.81	-0.3
2,287,703	+				+1.0
2,287,703	+				-1.1
2,287,703	+				-1.0
2,288,068	+		PS417_10705	0.31	+0.1
2,288,454	+		PS417_10705	0.66	-0.8
2,288,455	-		PS417_10705	0.66	+0.8
2,288,455	-		PS417_10705	0.66	-0.4
2,288,512	+		PS417_10705	0.72	-0.6
2,288,566	-		PS417_10705	0.77	-0.4
2,288,566	-		PS417_10705	0.77	-0.4
2,288,566	-		PS417_10705	0.77	+0.8