Strain Fitness in Pseudomonas simiae WCS417 around PS417_10605

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
2,262,673	+		PS417_10595	0.60	-1.7
2,262,706	+		PS417_10595	0.62	-0.8
2,262,706	+		PS417_10595	0.62	-1.0
2,262,706	+		PS417_10595	0.62	+2.0
2,262,707	-		PS417_10595	0.62	+1.1
2,262,707	-		PS417_10595	0.62	-0.2
2,262,707	-		PS417_10595	0.62	-0.7
2,262,707	-		PS417_10595	0.62	+0.6
2,262,707	-		PS417_10595	0.62	+2.6
2,262,793	+		PS417_10595	0.70	-0.5
2,262,934	+		PS417_10595	0.81	-1.5
2,262,934	+		PS417_10595	0.81	+0.8
2,262,935	-		PS417_10595	0.81	+1.1
2,262,935	-		PS417_10595	0.81	+0.3
2,262,935	-		PS417_10595	0.81	-1.1
2,262,979	+		PS417_10595	0.85	+0.2
2,262,979	+				+2.3
2,262,979	+		PS417_10595	0.85	-0.1
2,262,980	-		PS417_10595	0.85	-1.4
2,263,041	-				+1.3
2,263,066	+				+0.4
2,263,066	+				-0.5
2,263,067	-				-0.4
2,263,075	+				-0.2
2,263,075	+				-0.5
2,263,075	+				+0.4
2,263,076	-				-3.4
2,263,076	-				+1.2
2,263,076	-				+0.2
2,263,076	-				-1.1
2,263,186	-		PS417_10600	0.25	-1.0
2,263,288	-		PS417_10600	0.62	+1.0
2,263,878	+		PS417_10605	0.25	-0.2
2,263,879	-		PS417_10605	0.25	+0.0
2,263,882	+		PS417_10605	0.26	+0.1
2,263,882	+		PS417_10605	0.26	+0.2
2,263,883	-		PS417_10605	0.26	-2.5
2,264,122	-		PS417_10605	0.42	+0.3
2,264,498	-		PS417_10605	0.67	-0.2
2,264,613	+		PS417_10605	0.75	-0.5
2,264,614	-		PS417_10605	0.75	-0.4
2,264,809	+		PS417_10605	0.88	+0.7
2,264,810	-		PS417_10605	0.88	-0.2
2,264,810	-		PS417_10605	0.88	+1.0
2,264,888	+				-0.0
2,264,888	+				-0.2
2,264,973	+				-0.7
2,264,974	-				+0.4
2,264,974	-				-0.9
2,265,083	-				-0.9
2,265,153	-				-0.3
2,265,178	+				+0.7
2,265,179	-				-0.2
2,265,179	-				+0.1
2,265,475	-		PS417_10615	0.32	+0.2
2,265,475	-		PS417_10615	0.32	+1.4
2,265,475	-		PS417_10615	0.32	-0.2
2,265,475	-		PS417_10615	0.32	+0.4
2,265,928	+		PS417_10615	0.79	+1.0
2,265,929	-		PS417_10615	0.79	-0.2
2,265,929	-		PS417_10615	0.79	+1.2