Strain Fitness in Pseudomonas simiae WCS417 around PS417_10305

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
2,203,743	+				-1.8
2,203,903	-		PS417_10300	0.54	-0.6
2,203,957	+		PS417_10300	0.58	-0.9
2,203,959	+				-0.7
2,203,986	+		PS417_10300	0.60	+1.1
2,203,987	-		PS417_10300	0.60	+0.6
2,204,072	+		PS417_10300	0.66	+1.7
2,204,073	-		PS417_10300	0.67	-1.0
2,204,624	-				+0.8
2,204,680	+				-0.6
2,204,680	+				+1.3
2,204,680	+				+0.8
2,204,681	-				-0.1
2,204,681	-				+2.8
2,204,756	-				+0.5
2,204,840	-		PS417_10305	0.39	-1.9
2,204,926	+		PS417_10305	0.72	-0.9
2,204,963	-		PS417_10305	0.86	-0.5
2,205,291	+				-0.1
2,205,338	-				-0.8
2,205,471	+		PS417_10315	0.15	+1.5
2,205,472	-		PS417_10315	0.15	+0.7
2,205,481	+		PS417_10315	0.16	+0.6
2,205,924	+		PS417_10315	0.53	-0.5