Strain Fitness in Pseudomonas simiae WCS417 around PS417_10160

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
2,174,075	+				+1.8
2,174,076	-		PS417_10150	0.83	-2.6
2,174,181	-		PS417_10150	0.87	-0.3
2,174,296	+				-0.2
2,174,297	-				+0.6
2,174,474	+				+0.3
2,174,482	-				+2.9
2,174,482	-				-0.3
2,174,508	+				+0.5
2,174,520	-				-2.2
2,174,536	+				+2.3
2,174,542	+				-0.8
2,174,542	+				-0.7
2,174,840	-		PS417_10155	0.75	+1.8
2,174,840	-		PS417_10155	0.75	-0.7
2,174,929	-				+0.2
2,175,113	+		PS417_10160	0.23	-2.1
2,175,114	-		PS417_10160	0.24	+0.3
2,175,114	-		PS417_10160	0.24	+0.3
2,175,114	-		PS417_10160	0.24	+0.8
2,175,117	-		PS417_10160	0.24	-0.2
2,175,135	+		PS417_10160	0.26	-1.7
2,175,135	+				-1.0
2,175,135	+		PS417_10160	0.26	-0.6
2,175,164	+		PS417_10160	0.30	-0.8
2,175,304	-		PS417_10160	0.49	-0.1
2,175,376	-		PS417_10160	0.58	+0.5
2,175,791	+		PS417_10165	0.13	-0.5
2,175,841	-		PS417_10165	0.19	+0.2
2,175,854	+		PS417_10165	0.21	+0.6
2,176,075	+		PS417_10165	0.50	-0.4
2,176,075	+		PS417_10165	0.50	+0.2
2,176,185	-		PS417_10165	0.64	-0.4
2,176,203	+		PS417_10165	0.67	-0.4
2,176,203	+		PS417_10165	0.67	-0.2
2,176,283	+		PS417_10165	0.77	-1.0
2,176,284	-		PS417_10165	0.77	+1.0
2,176,440	+				-2.0
2,176,440	+				+0.7
2,176,441	-				-1.9
2,176,470	+				+0.3
2,176,570	+				+1.2
2,176,608	+				+1.2
2,176,608	+				-1.5
2,176,608	+				+2.1
2,176,609	-				-0.4
2,176,609	-				-1.1
2,176,609	-				+0.0
2,176,614	+				-1.0
2,176,615	-				-0.1
2,176,623	+				-0.6