Strain Fitness in Pseudomonas simiae WCS417 around PS417_09715

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
2,104,771	-		PS417_09705	0.70	-2.2
2,104,882	+		PS417_09705	0.85	+0.3
2,105,144	-		PS417_09710	0.20	-0.6
2,105,144	-		PS417_09710	0.20	+0.3
2,105,208	+		PS417_09710	0.29	-0.4
2,105,257	-				-0.6
2,105,274	+				+2.1
2,105,275	-		PS417_09710	0.38	-3.4
2,105,296	+		PS417_09710	0.41	+0.2
2,105,297	-		PS417_09710	0.41	+0.0
2,105,334	+				+1.4
2,105,440	-		PS417_09710	0.61	+0.1
2,105,553	+		PS417_09710	0.76	-0.7
2,105,554	-		PS417_09710	0.77	-0.2
2,105,961	+		PS417_09715	0.21	-1.4
2,105,981	-		PS417_09715	0.23	-0.2
2,106,335	+		PS417_09715	0.54	-1.0
2,106,384	-		PS417_09715	0.58	-1.0
2,106,665	-		PS417_09715	0.83	-0.2
2,106,722	+		PS417_09715	0.88	-1.5
2,106,722	+		PS417_09715	0.88	+1.4
2,106,722	+		PS417_09715	0.88	-1.4
2,106,722	+		PS417_09715	0.88	-1.0
2,106,722	+		PS417_09715	0.88	-2.2
2,106,723	-		PS417_09715	0.88	-0.3
2,106,827	+				+1.7
2,106,828	-				+0.3
2,106,828	-				+0.8
2,106,898	+				-1.2
2,106,906	+				-0.2
2,106,906	+				-1.0
2,106,906	+				-2.0
2,107,371	+		PS417_09720	0.66	+0.1
2,107,371	+		PS417_09720	0.66	+1.4
2,107,372	-		PS417_09720	0.66	-0.4
2,107,372	-				+0.4
2,107,392	+		PS417_09720	0.68	-1.1
2,107,395	+		PS417_09720	0.69	+2.3
2,107,395	+		PS417_09720	0.69	-1.4
2,107,396	-		PS417_09720	0.69	-0.5
2,107,396	-		PS417_09720	0.69	-0.2
2,107,458	+		PS417_09720	0.77	+0.3
2,107,459	-		PS417_09720	0.77	+0.2
2,107,497	+		PS417_09720	0.82	+1.5
2,107,584	+				+0.8
2,107,730	-				-1.4
2,107,744	+				+0.4