Strain Fitness in Pseudomonas simiae WCS417 around PS417_09490

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
2,054,292	+				-0.7
2,054,292	+				-2.2
2,054,293	-				+1.0
2,054,294	+				+1.1
2,054,294	+				+0.5
2,054,295	-				-0.1
2,054,295	-				-0.2
2,054,375	+		PS417_09485	0.14	-0.5
2,054,420	+		PS417_09485	0.19	-0.3
2,054,431	+		PS417_09485	0.20	-1.2
2,054,432	-		PS417_09485	0.21	-2.1
2,054,546	+		PS417_09485	0.33	+0.0
2,054,802	-		PS417_09485	0.61	-1.3
2,054,957	+		PS417_09485	0.78	-2.4
2,054,957	+		PS417_09485	0.78	-2.2
2,054,957	+		PS417_09485	0.78	+0.6
2,054,960	+		PS417_09485	0.79	+0.3
2,054,961	-		PS417_09485	0.79	+0.5
2,054,961	-		PS417_09485	0.79	-0.8
2,055,046	+		PS417_09485	0.88	-0.2
2,055,189	+				-0.3
2,055,191	+				+0.8
2,055,249	+				+0.4
2,055,249	+				+0.5
2,055,249	+				-0.1
2,055,249	+				+0.4
2,055,250	-				-0.9
2,055,250	-				+0.0
2,055,530	+				-0.6
2,055,530	+				-0.6
2,055,531	-		PS417_09490	0.27	+0.6
2,055,531	-		PS417_09490	0.27	-0.9
2,055,531	-		PS417_09490	0.27	+0.3
2,055,531	-		PS417_09490	0.27	+1.0
2,055,776	+		PS417_09490	0.51	+0.9
2,055,791	+		PS417_09490	0.53	-0.0
2,055,791	+		PS417_09490	0.53	+1.8
2,055,792	-		PS417_09490	0.53	-1.0
2,055,792	-		PS417_09490	0.53	-2.1
2,055,921	-		PS417_09490	0.66	-0.7
2,055,921	-		PS417_09490	0.66	-1.2
2,055,974	+		PS417_09490	0.71	-0.3
2,055,974	+		PS417_09490	0.71	-1.0
2,055,974	+		PS417_09490	0.71	+1.1
2,055,974	+		PS417_09490	0.71	-0.6
2,055,975	-		PS417_09490	0.72	-0.3
2,055,987	+		PS417_09490	0.73	-0.5
2,056,049	+		PS417_09490	0.79	+0.2
2,056,063	+		PS417_09490	0.80	-0.9
2,056,063	+		PS417_09490	0.80	+1.1
2,056,205	+				+1.6
2,056,313	-		PS417_09495	0.10	-1.6
2,056,384	+		PS417_09495	0.22	+0.0
2,056,384	+		PS417_09495	0.22	-0.6
2,056,573	+				-1.2
2,056,574	-				+1.4
2,056,574	-		PS417_09495	0.54	-0.0
2,056,622	+		PS417_09495	0.63	+1.3
2,056,622	+		PS417_09495	0.63	+0.2
2,056,659	-		PS417_09495	0.69	-0.3
2,056,736	+		PS417_09495	0.82	-0.1
2,056,736	+		PS417_09495	0.82	-0.7
2,056,836	+				-0.8
2,056,837	-				-0.1
2,056,860	+				+0.0
2,056,860	+				-2.1
2,056,949	-				+0.4
2,056,954	+		PS417_09500	0.10	+0.1
2,056,954	+		PS417_09500	0.10	+0.1
2,056,955	-		PS417_09500	0.11	-1.6
2,056,955	-		PS417_09500	0.11	-0.0