Strain Fitness in Pseudomonas simiae WCS417 around PS417_08985

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
1,955,726	-				-0.7
1,955,774	-				+0.9
1,955,774	-				+1.1
1,955,780	-				-0.8
1,955,780	-				+0.9
1,955,780	-				+1.4
1,955,785	-				-0.9
1,955,785	-				-0.2
1,955,818	-				+3.1
1,955,999	+				+0.9
1,956,000	-				+0.8
1,956,883	-		PS417_08985	0.50	+0.5
1,957,152	+		PS417_08985	0.64	-0.1
1,957,152	+		PS417_08985	0.64	+1.4
1,957,152	+		PS417_08985	0.64	-0.5
1,957,208	+		PS417_08985	0.67	-0.7
1,957,300	-		PS417_08985	0.72	+4.8
1,957,404	-		PS417_08985	0.77	-1.6
1,957,544	+		PS417_08985	0.84	+1.3
1,957,544	+		PS417_08985	0.84	+1.2
1,957,544	+		PS417_08985	0.84	-0.4
1,957,545	-		PS417_08985	0.84	+0.4
1,958,029	+		PS417_08990	0.21	+2.0
1,958,029	+		PS417_08990	0.21	+0.9
1,958,137	+		PS417_08990	0.32	+1.6
1,958,137	+		PS417_08990	0.32	-1.5
1,958,166	+		PS417_08990	0.35	-1.4
1,958,210	+		PS417_08990	0.40	-0.0
1,958,251	-		PS417_08990	0.45	-1.8
1,958,390	+		PS417_08990	0.60	-1.4
1,958,579	+		PS417_08990	0.80	-0.7
1,958,792	+				-0.4
1,958,813	+				+0.4
1,958,813	+				+1.2
1,958,813	+				+1.0
1,958,814	-				-1.4
1,958,814	-				-1.4
1,958,814	-				-0.0
1,958,814	-				-0.5