Strain Fitness in Pseudomonas simiae WCS417 around PS417_08820

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
1,918,463	+				-1.9
1,918,463	+				-1.3
1,918,463	+				+0.9
1,918,463	+				+3.2
1,918,463	+				-1.8
1,918,463	+				+0.9
1,918,510	+				-0.8
1,918,539	+				+0.4
1,918,539	+				+0.6
1,918,539	+				+0.4
1,918,539	+				-1.1
1,918,540	-				+0.2
1,918,540	-				-2.1
1,919,023	-		PS417_08815	0.82	-2.6
1,919,119	-				-0.8
1,919,119	-				-0.8
1,919,171	+				-0.3
1,919,171	+				-1.8
1,919,172	-				+0.9
1,919,172	-				-0.5
1,919,172	-				-1.3
1,919,172	-				-1.6
1,919,172	-				-1.1
1,919,172	-				+0.9
1,919,183	+				-2.4
1,919,240	-				-0.3
1,919,317	+		PS417_08820	0.17	-0.2
1,919,317	+		PS417_08820	0.17	-0.6
1,919,317	+		PS417_08820	0.17	-2.6
1,919,318	-		PS417_08820	0.17	+1.1
1,919,318	-		PS417_08820	0.17	-0.2
1,919,387	+		PS417_08820	0.32	+0.0
1,919,632	+		PS417_08820	0.86	+0.6
1,919,633	-		PS417_08820	0.86	-1.8
1,919,633	-		PS417_08820	0.86	+2.3
1,919,636	+		PS417_08820	0.87	+0.2
1,919,732	+				+2.4
1,919,733	-				-0.9
1,919,733	-				+0.7
1,919,741	+				-0.6
1,919,746	-				-0.2
1,919,837	+				+0.4
1,919,838	-				-0.9
1,919,838	-				-1.6
1,919,841	+				+2.2
1,919,842	-				-0.5
1,919,842	-				+0.0
1,919,842	-				+0.6
1,919,904	-				-0.5
1,920,194	+		PS417_08825	0.58	-0.2
1,920,311	+				+0.4
1,920,312	-		PS417_08825	0.77	-1.1
1,920,317	+		PS417_08825	0.78	-0.6
1,920,318	-		PS417_08825	0.78	+0.4
1,920,318	-		PS417_08825	0.78	-0.3
1,920,318	-		PS417_08825	0.78	-0.6
1,920,548	-				+0.9