Strain Fitness in Pseudomonas simiae WCS417 around PS417_00825

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
181,461	-		PS417_00820	0.83	+1.2
181,478	+		PS417_00820	0.89	+0.9
181,498	+				-1.1
181,499	-				-3.2
181,562	+				+1.0
181,562	+				-1.5
181,593	+				+1.0
181,745	+				-1.4
181,785	+				-1.9
181,785	+				-0.3
181,785	+				-0.2
181,786	-				-0.3
181,887	+				-0.6
181,942	+				+0.7
181,942	+				+0.3
181,942	+				-0.5
181,943	-				+0.2
181,943	-				+1.1
181,943	-				+2.3
182,021	+				-2.2
182,095	-				+0.8
182,095	-				+0.2
182,127	+				+0.8
182,145	+				-0.8
182,154	-				+2.1
182,154	-				-1.5
182,154	-				-0.6
182,230	-				-2.1
182,230	-				+2.3
182,230	-				+1.8
182,230	-				+0.6
182,306	+				-0.3
182,306	+				-1.1
182,328	-				-1.5
182,362	+				-0.1
182,362	+				-0.8
182,363	-				+1.1
182,363	-				-0.8
182,389	-				-0.4
182,639	-		PS417_00825	0.21	-0.1
182,695	+		PS417_00825	0.26	-1.5
182,736	+		PS417_00825	0.29	-2.2
183,253	-		PS417_00825	0.73	-0.7
183,683	-		PS417_00830	0.15	-0.4
183,695	-		PS417_00830	0.17	+0.2
183,697	+		PS417_00830	0.17	+0.6
183,737	+				+1.5
184,121	-		PS417_00830	0.74	-0.6
184,121	-		PS417_00830	0.74	-1.7
184,261	-				+0.5
184,261	-				+0.9
184,355	+				-0.8
184,355	+				-0.9
184,356	-				+0.1
184,359	+				+0.6
184,382	-				+0.0
184,501	+				+0.7