Strain Fitness in Pseudomonas simiae WCS417 around PS417_08080

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
1,766,857	+		PS417_08075	0.71	+0.5
1,766,857	+		PS417_08075	0.71	+0.3
1,766,890	+		PS417_08075	0.75	+0.5
1,766,891	-		PS417_08075	0.75	+0.5
1,766,920	+		PS417_08075	0.78	+0.2
1,766,921	-		PS417_08075	0.78	-0.7
1,767,285	-		PS417_08080	0.16	+1.1
1,767,285	-		PS417_08080	0.16	+0.4
1,767,452	+		PS417_08080	0.34	+1.0
1,767,453	-		PS417_08080	0.34	+1.4
1,767,478	+		PS417_08080	0.36	+0.4
1,767,478	+		PS417_08080	0.36	+0.3
1,767,479	-		PS417_08080	0.36	+1.1
1,767,479	-		PS417_08080	0.36	-0.3
1,767,479	-		PS417_08080	0.36	-1.0
1,767,481	+		PS417_08080	0.37	+1.3
1,767,482	-		PS417_08080	0.37	-0.3
1,767,482	-		PS417_08080	0.37	-0.4
1,767,575	+		PS417_08080	0.46	+0.3
1,767,810	+		PS417_08080	0.70	+0.4
1,767,811	-		PS417_08080	0.70	+2.3
1,767,811	-		PS417_08080	0.70	+0.7
1,767,974	+		PS417_08080	0.87	-1.4
1,768,166	-				-0.2
1,768,216	-				-0.8
1,768,304	+		PS417_08085	0.11	-0.1
1,768,394	+		PS417_08085	0.17	-1.4
1,768,662	-		PS417_08085	0.35	+1.1
1,768,810	+		PS417_08085	0.45	-1.0
1,768,983	+		PS417_08085	0.56	-1.3
1,768,983	+				+3.3
1,768,984	-		PS417_08085	0.56	-1.2
1,768,984	-		PS417_08085	0.56	-0.8
1,768,984	-				-1.5
1,769,040	-		PS417_08085	0.60	+0.5
1,769,060	+		PS417_08085	0.61	+0.6
1,769,061	-		PS417_08085	0.61	-1.4
1,769,066	+		PS417_08085	0.62	-1.1
1,769,066	+		PS417_08085	0.62	-0.6
1,769,094	-		PS417_08085	0.64	-1.2