Strain Fitness in Pseudomonas simiae WCS417 around PS417_07860

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
1,722,734	+		PS417_07850	0.30	+0.3
1,722,735	-		PS417_07850	0.31	-0.7
1,722,872	+		PS417_07850	0.50	+0.4
1,722,873	-				+0.3
1,722,873	-		PS417_07850	0.50	-2.3
1,722,873	-		PS417_07850	0.50	-0.1
1,722,878	+		PS417_07850	0.51	+0.1
1,723,089	+		PS417_07850	0.81	-0.3
1,723,168	+				-2.7
1,723,214	+				-0.1
1,723,214	+				-0.9
1,723,217	+				-1.0
1,723,218	-				+0.3
1,723,249	+				+0.3
1,723,258	+				-0.7
1,723,258	+				-0.7
1,723,259	-				-1.7
1,723,270	+				-0.2
1,723,276	+				+1.5
1,723,335	+		PS417_07855	0.16	-0.7
1,723,350	+		PS417_07855	0.22	+0.2
1,723,351	-		PS417_07855	0.22	-0.7
1,723,393	+		PS417_07855	0.37	-0.5
1,723,670	+				+0.5
1,723,671	-				+1.8
1,723,825	-		PS417_07860	0.20	+0.9
1,723,834	-				+2.1
1,723,834	-		PS417_07860	0.21	-0.0
1,723,857	+		PS417_07860	0.24	+0.5
1,723,860	-		PS417_07860	0.24	+0.4
1,723,991	+		PS417_07860	0.40	+0.5
1,724,109	+		PS417_07860	0.54	-2.0
1,724,110	-		PS417_07860	0.55	+1.6
1,724,118	-		PS417_07860	0.56	-2.0
1,724,476	+				-0.7
1,724,634	+		PS417_07865	0.40	+1.5
1,724,635	-		PS417_07865	0.40	-1.6
1,724,846	+				-2.3
1,724,892	-				+1.6
1,725,006	+		PS417_07870	0.23	-2.5
1,725,202	-		PS417_07870	0.52	+0.0
1,725,229	+		PS417_07870	0.56	+0.9
1,725,230	-		PS417_07870	0.56	+0.7
1,725,230	-				+1.3