Strain Fitness in Pseudomonas simiae WCS417 around PS417_07295

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
1,607,952	-		PS417_07290	0.31	-1.7
1,608,375	+		PS417_07290	0.60	-0.1
1,608,614	+		PS417_07290	0.77	+0.0
1,608,614	+		PS417_07290	0.77	-0.9
1,608,615	-		PS417_07290	0.77	+0.7
1,608,617	+		PS417_07290	0.77	+0.1
1,608,617	+		PS417_07290	0.77	-0.8
1,608,618	-		PS417_07290	0.77	+1.2
1,608,742	+		PS417_07290	0.86	-0.9
1,608,923	+				+1.0
1,608,923	+				+1.7
1,608,923	+				+0.4
1,608,924	-				-0.7
1,608,924	-				+0.6
1,608,924	-				-1.6
1,608,924	-				-2.2
1,608,924	-				-0.7
1,608,924	-				-0.8
1,608,924	-				-1.4
1,608,924	-				-1.6
1,608,949	-				+0.3
1,609,108	+		PS417_07295	0.10	+0.8
1,609,108	+		PS417_07295	0.10	-0.2
1,609,109	-		PS417_07295	0.10	-0.5
1,609,109	-		PS417_07295	0.10	-0.7
1,609,150	+		PS417_07295	0.13	-0.3
1,609,150	+		PS417_07295	0.13	-1.1
1,609,151	-		PS417_07295	0.13	-0.5
1,609,168	+		PS417_07295	0.14	+0.0
1,609,639	-				-0.3
1,609,771	-		PS417_07295	0.51	-1.0
1,609,771	-		PS417_07295	0.51	-0.3
1,610,551	-				+0.4
1,610,551	-				-0.7
1,610,570	+				-0.3
1,610,570	+				+0.0
1,610,570	+				-0.2
1,610,570	+				+0.5
1,610,571	-				-0.3
1,610,571	-				+1.0
1,610,571	-				+0.7
1,610,583	+				-0.0
1,610,594	+				+0.3
1,610,594	+				+2.9
1,610,650	+				-0.0
1,610,650	+				-2.3
1,610,651	-				-1.7
1,610,681	+				-0.4
1,610,682	-				+0.8
1,611,111	+		PS417_07300	0.49	+0.5
1,611,111	+		PS417_07300	0.49	+0.8
1,611,111	+		PS417_07300	0.49	+0.3
1,611,111	+				-0.3
1,611,111	+		PS417_07300	0.49	-0.1
1,611,112	-		PS417_07300	0.49	+0.2
1,611,112	-		PS417_07300	0.49	-2.6
1,611,112	-		PS417_07300	0.49	-0.7
1,611,466	-		PS417_07300	0.89	+2.5
1,611,468	+		PS417_07300	0.89	-1.0
1,611,468	+		PS417_07300	0.89	+0.0
1,611,469	-		PS417_07300	0.90	+1.5