Strain Fitness in Pseudomonas simiae WCS417 around PS417_07240

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
1,596,436	+		PS417_07230	0.68	-0.1
1,596,436	+		PS417_07230	0.68	-0.2
1,596,532	+		PS417_07230	0.75	+1.0
1,596,532	+		PS417_07230	0.75	+0.3
1,596,532	+		PS417_07230	0.75	-2.2
1,596,533	-		PS417_07230	0.75	-0.3
1,596,533	-		PS417_07230	0.75	-2.7
1,596,533	-		PS417_07230	0.75	-0.6
1,596,739	+				-0.5
1,596,739	+				+0.3
1,596,740	-				-1.9
1,596,798	-				-0.7
1,596,807	+				+1.2
1,596,883	+				+0.0
1,596,883	+				-1.5
1,596,883	+				+0.2
1,596,884	-				-0.0
1,596,914	-				+0.2
1,596,930	-				+0.1
1,596,938	+				-1.0
1,596,939	-				-0.2
1,596,985	-				+0.4
1,597,012	+				-1.7
1,597,012	+				-1.7
1,597,037	-				+0.1
1,597,196	-				+1.2
1,597,206	+				-2.9
1,597,206	+				-2.4
1,597,207	-				+0.1
1,597,210	+				+0.3
1,597,341	+				-3.2
1,597,342	-				+0.7
1,597,342	-				+1.2
1,597,369	+				+0.4
1,597,381	-				-1.0
1,597,381	-				-2.1
1,597,381	-				-0.8
1,597,381	-				+0.6
1,597,457	+				-0.0
1,597,854	+		PS417_07240	0.62	+0.4
1,597,854	+		PS417_07240	0.62	+0.2
1,597,854	+		PS417_07240	0.62	+1.6
1,597,854	+		PS417_07240	0.62	+0.0
1,597,855	-		PS417_07240	0.62	+0.5
1,598,117	+				-0.3
1,598,136	+				-0.1
1,598,137	-				+2.9
1,598,164	-				-0.1
1,598,220	-		PS417_07245	0.12	+2.2
1,598,551	+		PS417_07245	0.54	-0.0
1,598,598	-		PS417_07245	0.60	+0.3
1,598,907	-				-0.0
1,598,907	-				-0.1
1,598,913	-				-0.2
1,598,963	+				+1.1
1,598,964	-				-1.1
1,598,964	-				-0.0
1,599,008	+				+0.9
1,599,009	-				+0.6
1,599,009	-				-1.9
1,599,036	-				-0.3