Strain Fitness in Pseudomonas simiae WCS417 around PS417_07110

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
1,572,170	+				-1.4
1,572,170	+				-1.0
1,572,170	+				-2.4
1,572,170	+				+0.3
1,572,193	+				+0.9
1,572,193	+				-1.3
1,572,246	-				+1.1
1,572,246	-				+1.4
1,572,247	+				-1.0
1,572,247	+				-1.0
1,572,527	+				+1.0
1,572,528	-				-0.3
1,572,528	-				+0.1
1,572,530	+				-0.5
1,572,576	+		PS417_07110	0.14	-1.0
1,572,631	-		PS417_07110	0.26	+2.8
1,572,631	-		PS417_07110	0.26	+1.5
1,572,631	-		PS417_07110	0.26	+1.0
1,572,689	+		PS417_07110	0.39	-0.4
1,573,001	+				+1.5
1,573,001	+				+1.3
1,573,103	+		PS417_07115	0.11	+4.0
1,573,103	+		PS417_07115	0.11	-0.5
1,573,103	+		PS417_07115	0.11	+1.4
1,573,104	-		PS417_07115	0.11	+1.1
1,573,104	-		PS417_07115	0.11	+0.3
1,573,107	+		PS417_07115	0.11	-0.3
1,573,107	+		PS417_07115	0.11	-0.4
1,573,113	-		PS417_07115	0.11	+1.1
1,573,196	+		PS417_07115	0.17	+0.4
1,573,197	-		PS417_07115	0.17	-0.9
1,573,197	-		PS417_07115	0.17	-0.6
1,573,230	+		PS417_07115	0.19	-0.3
1,573,230	+		PS417_07115	0.19	+0.7
1,573,433	+		PS417_07115	0.31	-0.7
1,573,433	+		PS417_07115	0.31	+1.5
1,573,433	+		PS417_07115	0.31	-0.8
1,573,434	-		PS417_07115	0.31	+1.4
1,573,800	-		PS417_07115	0.54	+2.3
1,573,906	-		PS417_07115	0.60	-0.1
1,573,907	+		PS417_07115	0.61	+1.3
1,573,908	-		PS417_07115	0.61	-0.1
1,573,908	-		PS417_07115	0.61	-0.1
1,573,908	-		PS417_07115	0.61	-1.5
1,573,914	-		PS417_07115	0.61	+0.0
1,573,914	-		PS417_07115	0.61	+0.8