Strain Fitness in Pseudomonas simiae WCS417 around PS417_06705

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
1,484,698	+		PS417_06700	0.17	+0.3
1,484,880	-		PS417_06700	0.39	-0.4
1,485,255	-		PS417_06700	0.82	-2.1
1,485,255	-		PS417_06700	0.82	-0.5
1,485,278	+				+1.3
1,485,339	-				-0.0
1,485,404	+				-0.1
1,485,405	-				+0.7
1,485,405	-				+1.2
1,485,412	+				+1.1
1,485,765	+		PS417_06705	0.46	+0.2
1,485,770	+		PS417_06705	0.47	+1.3
1,485,770	+		PS417_06705	0.47	+0.8
1,485,771	-		PS417_06705	0.47	+2.0
1,485,771	-		PS417_06705	0.47	+0.5
1,486,196	-				+0.5
1,486,196	-				+0.2
1,486,200	-				-1.0
1,486,200	-				+0.7
1,486,595	+		PS417_06710	0.34	-0.8
1,486,705	-		PS417_06710	0.43	-1.1