Strain Fitness in Pseudomonas simiae WCS417 around PS417_06195

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
1,372,495	-		PS417_06190	0.42	+0.3
1,372,495	-		PS417_06190	0.42	-0.2
1,373,037	-		PS417_06190	0.75	-0.1
1,373,248	+		PS417_06190	0.87	+0.7
1,373,249	-		PS417_06190	0.88	-1.7
1,373,249	-		PS417_06190	0.88	-1.1
1,373,249	-		PS417_06190	0.88	-1.4
1,373,356	-				-0.9
1,373,356	-				+1.5
1,373,421	-				+0.2
1,373,594	+				-0.3
1,373,609	-		PS417_06195	0.12	-1.2
1,373,681	+		PS417_06195	0.18	+1.9
1,373,682	-		PS417_06195	0.18	-1.2
1,373,847	-		PS417_06195	0.32	-1.1
1,373,932	-		PS417_06195	0.39	-0.6
1,374,072	-		PS417_06195	0.50	+0.7
1,374,236	+		PS417_06195	0.64	-0.4
1,374,237	-		PS417_06195	0.64	-0.7
1,374,275	+		PS417_06195	0.67	-3.3
1,374,275	+		PS417_06195	0.67	-0.4
1,374,276	-		PS417_06195	0.67	-1.7
1,374,276	-		PS417_06195	0.67	+0.6
1,374,276	-		PS417_06195	0.67	-2.1
1,374,285	-		PS417_06195	0.68	-0.3
1,374,644	-				+0.5
1,374,726	-				+0.1
1,374,726	-				+0.5
1,374,736	+				+0.1
1,374,812	-				+0.9
1,375,272	+		PS417_06200	0.17	-0.1
1,375,272	+		PS417_06200	0.17	+1.6
1,375,273	-		PS417_06200	0.17	+1.7
1,375,273	-		PS417_06200	0.17	+2.1
1,375,273	-		PS417_06200	0.17	+1.8
1,375,389	+		PS417_06200	0.21	+2.5
1,375,527	+		PS417_06200	0.26	+1.8
1,375,593	-		PS417_06200	0.29	+1.5