Strain Fitness in Pseudomonas simiae WCS417 around PS417_05250

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
1,164,044	-		PS417_05245	0.51	+2.4
1,164,477	+				+0.3
1,164,477	+				+1.4
1,164,546	+				-1.8
1,164,547	-				-0.1
1,164,662	+				+0.0
1,164,676	-				-0.1
1,164,733	-				-1.8
1,164,742	+				+0.1
1,164,743	-				+0.3
1,164,850	-				+1.2
1,165,052	+		PS417_05250	0.13	-2.3
1,165,053	-		PS417_05250	0.13	+0.2
1,165,064	+		PS417_05250	0.14	+0.4
1,165,126	+		PS417_05250	0.19	-0.6
1,165,445	-		PS417_05250	0.43	-0.1
1,165,626	-		PS417_05250	0.57	-2.5
1,165,817	+		PS417_05250	0.72	-1.3
1,166,204	+				-0.7
1,166,516	+		PS417_05255	0.36	-1.8
1,166,566	-		PS417_05255	0.42	-0.6
1,166,632	-		PS417_05255	0.49	+0.3
1,166,667	+		PS417_05255	0.53	-0.1
1,166,668	-		PS417_05255	0.53	+0.6
1,166,670	+		PS417_05255	0.54	+0.1
1,166,670	+		PS417_05255	0.54	+0.8
1,166,670	+		PS417_05255	0.54	-0.0
1,166,671	-		PS417_05255	0.54	+0.4
1,166,707	-		PS417_05255	0.58	+0.4