Strain Fitness in Pseudomonas simiae WCS417 around PS417_05015

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
1,114,492	+				+2.3
1,114,492	+				-1.2
1,114,492	+				+0.1
1,114,492	+				-0.3
1,114,493	-				-0.8
1,114,564	+				+1.5
1,114,565	-				-0.3
1,114,578	+				+0.4
1,114,803	+		PS417_05010	0.30	-0.8
1,114,803	+		PS417_05010	0.30	-1.2
1,114,804	-		PS417_05010	0.30	-0.1
1,115,197	-				+1.5
1,115,290	-				+0.5
1,115,385	-				+0.5
1,115,386	+				-0.7
1,115,386	+				-0.3
1,115,386	+				+0.4
1,115,387	-				-1.3
1,115,387	-				+0.0
1,115,413	+				-0.7
1,115,481	-				+2.3
1,115,481	-				-0.2
1,115,793	+		PS417_05015	0.25	+0.2
1,115,794	-		PS417_05015	0.25	+1.1
1,115,843	+		PS417_05015	0.29	+0.2
1,115,843	+		PS417_05015	0.29	+0.6
1,115,933	-		PS417_05015	0.36	+3.5
1,115,933	-		PS417_05015	0.36	-0.8
1,116,349	+				-1.3
1,116,461	+		PS417_05015	0.77	+2.7
1,116,462	-		PS417_05015	0.77	-0.4
1,116,538	+		PS417_05015	0.83	+0.8
1,116,648	+				-0.8
1,116,698	+				+2.1
1,116,767	-				-1.1
1,117,217	+		PS417_05020	0.36	+0.5